chore: update dependencies and add some files to .gitignore

- Update the `Cargo.toml` to include the `doi2bib` dependency with version `0.2.0`
- Add rules to ignore `.direnv`, `.envrc`, and `devbox.json` files in the `.gitignore`

1 files changed, 991 insertions, 2 deletions

diff --git a/Cargo.lock b/Cargo.lock
index a6c926b..f00bd10 100644
--- a/Cargo.lock
+++ b/Cargo.lock
@@ -24,6 +24,15 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "512761e0bb2578dd7380c6baaa0f4ce03e84f95e960231d1dec8bf4d7d6e2627"
 
 [[package]]
+name = "aho-corasick"
+version = "1.1.3"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "8e60d3430d3a69478ad0993f19238d2df97c507009a52b3c10addcd7f6bcb916"
+dependencies = [
+ "memchr",
+]
+
+[[package]]
 name = "allocator-api2"
 version = "0.2.18"
 source = "registry+https://github.com/rust-lang/crates.io-index"
@@ -49,6 +58,12 @@ dependencies = [
 ]
 
 [[package]]
+name = "atomic-waker"
+version = "1.1.2"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "1505bd5d3d116872e7271a6d4e16d81d0c8570876c8de68093a09ac269d8aac0"
+
+[[package]]
 name = "autocfg"
 version = "1.4.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
@@ -70,6 +85,12 @@ dependencies = [
 ]
 
 [[package]]
+name = "base64"
+version = "0.22.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "72b3254f16251a8381aa12e40e3c4d2f0199f8c6508fbecb9d91f575e0fbb8c6"
+
+[[package]]
 name = "bibiman"
 version = "0.8.2"
 dependencies = [
@@ -78,6 +99,7 @@ dependencies = [
  "color-eyre",
  "crossterm",
  "dirs",
+ "doi2bib",
  "editor-command",
  "futures",
  "itertools",
@@ -126,6 +148,12 @@ dependencies = [
 ]
 
 [[package]]
+name = "bumpalo"
+version = "3.16.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "79296716171880943b8470b5f8d03aa55eb2e645a4874bdbb28adb49162e012c"
+
+[[package]]
 name = "bytemuck"
 version = "1.19.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
@@ -254,7 +282,7 @@ dependencies = [
  "bitflags 1.3.2",
  "core-foundation",
  "core-graphics-types",
- "foreign-types",
+ "foreign-types 0.5.0",
  "libc",
 ]
 
@@ -337,6 +365,17 @@ dependencies = [
 ]
 
 [[package]]
+name = "displaydoc"
+version = "0.2.5"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "97369cbbc041bc366949bc74d34658d6cda5621039731c6310521892a3a20ae0"
+dependencies = [
+ "proc-macro2",
+ "quote",
+ "syn",
+]
+
+[[package]]
 name = "dlib"
 version = "0.5.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
@@ -346,6 +385,17 @@ dependencies = [
 ]
 
 [[package]]
+name = "doi2bib"
+version = "0.2.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "eca60cb06bb91c55c99ff39794dafda71dd27d0d7dae2bc1b51acbd709e261fd"
+dependencies = [
+ "once_cell",
+ "regex",
+ "reqwest",
+]
+
+[[package]]
 name = "downcast-rs"
 version = "1.2.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
@@ -367,6 +417,15 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "60b1af1c220855b6ceac025d3f6ecdd2b7c4894bfe9cd9bda4fbb4bc7c0d4cf0"
 
 [[package]]
+name = "encoding_rs"
+version = "0.8.35"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "75030f3c4f45dafd7586dd6780965a8c7e8e285a5ecb86713e63a79c5b2766f3"
+dependencies = [
+ "cfg-if",
+]
+
+[[package]]
 name = "equivalent"
 version = "1.0.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
@@ -443,12 +502,21 @@ checksum = "f81ec6369c545a7d40e4589b5597581fa1c441fe1cce96dd1de43159910a36a2"
 
 [[package]]
 name = "foreign-types"
+version = "0.3.2"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "f6f339eb8adc052cd2ca78910fda869aefa38d22d5cb648e6485e4d3fc06f3b1"
+dependencies = [
+ "foreign-types-shared 0.1.1",
+]
+
+[[package]]
+name = "foreign-types"
 version = "0.5.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "d737d9aa519fb7b749cbc3b962edcf310a8dd1f4b67c91c4f83975dbdd17d965"
 dependencies = [
  "foreign-types-macros",
- "foreign-types-shared",
+ "foreign-types-shared 0.3.1",
 ]
 
 [[package]]
@@ -464,11 +532,26 @@ dependencies = [
 
 [[package]]
 name = "foreign-types-shared"
+version = "0.1.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "00b0228411908ca8685dba7fc2cdd70ec9990a6e753e89b6ac91a84c40fbaf4b"
+
+[[package]]
+name = "foreign-types-shared"
 version = "0.3.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "aa9a19cbb55df58761df49b23516a86d432839add4af60fc256da840f66ed35b"
 
 [[package]]
+name = "form_urlencoded"
+version = "1.2.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "e13624c2627564efccf4934284bdd98cbaa14e79b0b5a141218e507b3a823456"
+dependencies = [
+ "percent-encoding",
+]
+
+[[package]]
 name = "futures"
 version = "0.3.31"
 source = "registry+https://github.com/rust-lang/crates.io-index"
@@ -585,6 +668,25 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "4271d37baee1b8c7e4b708028c57d816cf9d2434acb33a549475f78c181f6253"
 
 [[package]]
+name = "h2"
+version = "0.4.7"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "ccae279728d634d083c00f6099cb58f01cc99c145b84b8be2f6c74618d79922e"
+dependencies = [
+ "atomic-waker",
+ "bytes",
+ "fnv",
+ "futures-core",
+ "futures-sink",
+ "http",
+ "indexmap",
+ "slab",
+ "tokio",
+ "tokio-util",
+ "tracing",
+]
+
+[[package]]
 name = "hashbrown"
 version = "0.15.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
@@ -617,6 +719,257 @@ dependencies = [
 ]
 
 [[package]]
+name = "http"
+version = "1.1.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "21b9ddb458710bc376481b842f5da65cdf31522de232c1ca8146abce2a358258"
+dependencies = [
+ "bytes",
+ "fnv",
+ "itoa",
+]
+
+[[package]]
+name = "http-body"
+version = "1.0.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "1efedce1fb8e6913f23e0c92de8e62cd5b772a67e7b3946df930a62566c93184"
+dependencies = [
+ "bytes",
+ "http",
+]
+
+[[package]]
+name = "http-body-util"
+version = "0.1.2"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "793429d76616a256bcb62c2a2ec2bed781c8307e797e2598c50010f2bee2544f"
+dependencies = [
+ "bytes",
+ "futures-util",
+ "http",
+ "http-body",
+ "pin-project-lite",
+]
+
+[[package]]
+name = "httparse"
+version = "1.9.5"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "7d71d3574edd2771538b901e6549113b4006ece66150fb69c0fb6d9a2adae946"
+
+[[package]]
+name = "hyper"
+version = "1.5.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "97818827ef4f364230e16705d4706e2897df2bb60617d6ca15d598025a3c481f"
+dependencies = [
+ "bytes",
+ "futures-channel",
+ "futures-util",
+ "h2",
+ "http",
+ "http-body",
+ "httparse",
+ "itoa",
+ "pin-project-lite",
+ "smallvec",
+ "tokio",
+ "want",
+]
+
+[[package]]
+name = "hyper-rustls"
+version = "0.27.3"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "08afdbb5c31130e3034af566421053ab03787c640246a446327f550d11bcb333"
+dependencies = [
+ "futures-util",
+ "http",
+ "hyper",
+ "hyper-util",
+ "rustls",
+ "rustls-pki-types",
+ "tokio",
+ "tokio-rustls",
+ "tower-service",
+]
+
+[[package]]
+name = "hyper-tls"
+version = "0.6.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "70206fc6890eaca9fde8a0bf71caa2ddfc9fe045ac9e5c70df101a7dbde866e0"
+dependencies = [
+ "bytes",
+ "http-body-util",
+ "hyper",
+ "hyper-util",
+ "native-tls",
+ "tokio",
+ "tokio-native-tls",
+ "tower-service",
+]
+
+[[package]]
+name = "hyper-util"
+version = "0.1.10"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "df2dcfbe0677734ab2f3ffa7fa7bfd4706bfdc1ef393f2ee30184aed67e631b4"
+dependencies = [
+ "bytes",
+ "futures-channel",
+ "futures-util",
+ "http",
+ "http-body",
+ "hyper",
+ "pin-project-lite",
+ "socket2",
+ "tokio",
+ "tower-service",
+ "tracing",
+]
+
+[[package]]
+name = "icu_collections"
+version = "1.5.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "db2fa452206ebee18c4b5c2274dbf1de17008e874b4dc4f0aea9d01ca79e4526"
+dependencies = [
+ "displaydoc",
+ "yoke",
+ "zerofrom",
+ "zerovec",
+]
+
+[[package]]
+name = "icu_locid"
+version = "1.5.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "13acbb8371917fc971be86fc8057c41a64b521c184808a698c02acc242dbf637"
+dependencies = [
+ "displaydoc",
+ "litemap",
+ "tinystr",
+ "writeable",
+ "zerovec",
+]
+
+[[package]]
+name = "icu_locid_transform"
+version = "1.5.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "01d11ac35de8e40fdeda00d9e1e9d92525f3f9d887cdd7aa81d727596788b54e"
+dependencies = [
+ "displaydoc",
+ "icu_locid",
+ "icu_locid_transform_data",
+ "icu_provider",
+ "tinystr",
+ "zerovec",
+]
+
+[[package]]
+name = "icu_locid_transform_data"
+version = "1.5.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "fdc8ff3388f852bede6b579ad4e978ab004f139284d7b28715f773507b946f6e"
+
+[[package]]
+name = "icu_normalizer"
+version = "1.5.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "19ce3e0da2ec68599d193c93d088142efd7f9c5d6fc9b803774855747dc6a84f"
+dependencies = [
+ "displaydoc",
+ "icu_collections",
+ "icu_normalizer_data",
+ "icu_properties",
+ "icu_provider",
+ "smallvec",
+ "utf16_iter",
+ "utf8_iter",
+ "write16",
+ "zerovec",
+]
+
+[[package]]
+name = "icu_normalizer_data"
+version = "1.5.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "f8cafbf7aa791e9b22bec55a167906f9e1215fd475cd22adfcf660e03e989516"
+
+[[package]]
+name = "icu_properties"
+version = "1.5.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "93d6020766cfc6302c15dbbc9c8778c37e62c14427cb7f6e601d849e092aeef5"
+dependencies = [
+ "displaydoc",
+ "icu_collections",
+ "icu_locid_transform",
+ "icu_properties_data",
+ "icu_provider",
+ "tinystr",
+ "zerovec",
+]
+
+[[package]]
+name = "icu_properties_data"
+version = "1.5.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "67a8effbc3dd3e4ba1afa8ad918d5684b8868b3b26500753effea8d2eed19569"
+
+[[package]]
+name = "icu_provider"
+version = "1.5.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "6ed421c8a8ef78d3e2dbc98a973be2f3770cb42b606e3ab18d6237c4dfde68d9"
+dependencies = [
+ "displaydoc",
+ "icu_locid",
+ "icu_provider_macros",
+ "stable_deref_trait",
+ "tinystr",
+ "writeable",
+ "yoke",
+ "zerofrom",
+ "zerovec",
+]
+
+[[package]]
+name = "icu_provider_macros"
+version = "1.5.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "1ec89e9337638ecdc08744df490b221a7399bf8d164eb52a665454e60e075ad6"
+dependencies = [
+ "proc-macro2",
+ "quote",
+ "syn",
+]
+
+[[package]]
+name = "idna"
+version = "1.0.3"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "686f825264d630750a544639377bae737628043f20d38bbc029e8f29ea968a7e"
+dependencies = [
+ "idna_adapter",
+ "smallvec",
+ "utf8_iter",
+]
+
+[[package]]
+name = "idna_adapter"
+version = "1.2.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "daca1df1c957320b2cf139ac61e7bd64fed304c5040df000a745aa1de3b4ef71"
+dependencies = [
+ "icu_normalizer",
+ "icu_properties",
+]
+
+[[package]]
 name = "image"
 version = "0.25.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
@@ -662,6 +1015,12 @@ dependencies = [
 ]
 
 [[package]]
+name = "ipnet"
+version = "2.10.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "ddc24109865250148c2e0f3d25d4f0f479571723792d3802153c60922a4fb708"
+
+[[package]]
 name = "itertools"
 version = "0.13.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
@@ -683,6 +1042,16 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "f5d4a7da358eff58addd2877a45865158f0d78c911d43a5784ceb7bbf52833b0"
 
 [[package]]
+name = "js-sys"
+version = "0.3.74"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "a865e038f7f6ed956f788f0d7d60c541fff74c7bd74272c5d4cf15c63743e705"
+dependencies = [
+ "once_cell",
+ "wasm-bindgen",
+]
+
+[[package]]
 name = "lazy_static"
 version = "1.5.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
@@ -727,6 +1096,12 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "78b3ae25bc7c8c38cec158d1f2757ee79e9b3740fbc7ccf0e59e4b08d793fa89"
 
 [[package]]
+name = "litemap"
+version = "0.7.4"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "4ee93343901ab17bd981295f2cf0026d4ad018c7c31ba84549a4ddbb47a45104"
+
+[[package]]
 name = "lock_api"
 version = "0.4.12"
 source = "registry+https://github.com/rust-lang/crates.io-index"
@@ -758,6 +1133,12 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "78ca9ab1a0babb1e7d5695e3530886289c18cf2f87ec19a575a0abdce112e3a3"
 
 [[package]]
+name = "mime"
+version = "0.3.17"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "6877bb514081ee2a7ff5ef9de3281f14a4dd4bceac4c09388074a6b5df8a139a"
+
+[[package]]
 name = "minimal-lexical"
 version = "0.2.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
@@ -796,6 +1177,23 @@ dependencies = [
 ]
 
 [[package]]
+name = "native-tls"
+version = "0.2.12"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "a8614eb2c83d59d1c8cc974dd3f920198647674a0a035e1af1fa58707e317466"
+dependencies = [
+ "libc",
+ "log",
+ "openssl",
+ "openssl-probe",
+ "openssl-sys",
+ "schannel",
+ "security-framework",
+ "security-framework-sys",
+ "tempfile",
+]
+
+[[package]]
 name = "nix"
 version = "0.28.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
@@ -957,6 +1355,50 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "1261fe7e33c73b354eab43b1273a57c8f967d0391e80353e51f764ac02cf6775"
 
 [[package]]
+name = "openssl"
+version = "0.10.68"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "6174bc48f102d208783c2c84bf931bb75927a617866870de8a4ea85597f871f5"
+dependencies = [
+ "bitflags 2.6.0",
+ "cfg-if",
+ "foreign-types 0.3.2",
+ "libc",
+ "once_cell",
+ "openssl-macros",
+ "openssl-sys",
+]
+
+[[package]]
+name = "openssl-macros"
+version = "0.1.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "a948666b637a0f465e8564c73e89d4dde00d72d4d473cc972f390fc3dcee7d9c"
+dependencies = [
+ "proc-macro2",
+ "quote",
+ "syn",
+]
+
+[[package]]
+name = "openssl-probe"
+version = "0.1.5"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "ff011a302c396a5197692431fc1948019154afc178baf7d8e37367442a4601cf"
+
+[[package]]
+name = "openssl-sys"
+version = "0.9.104"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "45abf306cbf99debc8195b66b7346498d7b10c210de50418b5ccd7ceba08c741"
+dependencies = [
+ "cc",
+ "libc",
+ "pkg-config",
+ "vcpkg",
+]
+
+[[package]]
 name = "option-ext"
 version = "0.2.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
@@ -1008,6 +1450,12 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "57c0d7b74b563b49d38dae00a0c37d4d6de9b432382b2892f0574ddcae73fd0a"
 
 [[package]]
+name = "percent-encoding"
+version = "2.3.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "e3148f5046208a5d56bcfc03053e3ca6334e51da8dfb19b6cdc8b306fae3283e"
+
+[[package]]
 name = "petgraph"
 version = "0.6.5"
 source = "registry+https://github.com/rust-lang/crates.io-index"
@@ -1117,6 +1565,93 @@ dependencies = [
 ]
 
 [[package]]
+name = "regex"
+version = "1.11.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "b544ef1b4eac5dc2db33ea63606ae9ffcfac26c1416a2806ae0bf5f56b201191"
+dependencies = [
+ "aho-corasick",
+ "memchr",
+ "regex-automata",
+ "regex-syntax",
+]
+
+[[package]]
+name = "regex-automata"
+version = "0.4.9"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "809e8dc61f6de73b46c85f4c96486310fe304c434cfa43669d7b40f711150908"
+dependencies = [
+ "aho-corasick",
+ "memchr",
+ "regex-syntax",
+]
+
+[[package]]
+name = "regex-syntax"
+version = "0.8.5"
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@@ -1157,6 +1731,15 @@ dependencies = [
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@@ -1169,6 +1752,73 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
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@@ -1290,6 +1958,47 @@ dependencies = [
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@@ -1344,6 +2053,16 @@ dependencies = [
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@@ -1388,6 +2107,27 @@ dependencies = [
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+ "rustls-pki-types",
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@@ -1401,6 +2141,12 @@ dependencies = [
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+
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@@ -1456,6 +2202,12 @@ dependencies = [
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@@ -1516,12 +2268,47 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
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@@ -1532,12 +2319,89 @@ dependencies = [
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+dependencies = [
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+ "once_cell",
+ "wasm-bindgen-macro",
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+ "log",
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+ "web-sys",
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+dependencies = [
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+dependencies = [
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+
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@@ -1611,6 +2475,16 @@ dependencies = [
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+dependencies = [
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+ "wasm-bindgen",
+]
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@@ -1648,6 +2522,36 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
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@@ -1816,6 +2720,18 @@ dependencies = [
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@@ -1831,3 +2747,76 @@ name = "x11rb-protocol"
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